Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs7845529 | chr8:30106653 | G/A | 1.07E-6 | 211 | 15.07 | 21.35 | 4.88 | KM Plot |
KIRP | rs78457119 | chr17:80848714 | G/A | 0.00011 | 210 | 14.87 | 18.63 | 13.17 | KM Plot |
KIRP | rs78510409 | chr11:34939443 | T/G | 4.21E-12 | 214 | 17.08 | 12.6 | 5.57 | KM Plot |
KIRP | rs78523677 | chr5:176551103 | C/A | 2.66E-7 | 211 | 14.97 | 19.27 | 9.77 | KM Plot |
KIRP | rs78538387 | chr16:4523167 | G/A | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs7870227 | chr9:116313582 | A/C | 1.37E-5 | 214 | 17.2 | 14.17 | 2.13 | KM Plot |
KIRP | rs78723637 | chr8:30035919 | C/T | 1.44E-6 | 210 | 15.33 | 17 | 0.2 | KM Plot |
KIRP | rs7874564 | chr9:106726855 | G/A | 1.26E-8 | 211 | 16.53 | 10.2 | 10.55 | KM Plot |
KIRP | rs7875202 | chr9:106726672 | C/G | 1.26E-8 | 211 | 16.53 | 10.2 | 10.55 | KM Plot |
KIRP | rs78790589 | chr10:75539598 | G/A | 0 | 214 | 15.88 | 18.72 | 2.47 | KM Plot |
KIRP | rs78837425 | chr14:52559210 | CT/C | 3.26E-9 | 214 | 16.93 | 15.65 | 4.07 | KM Plot |
KIRP | rs78843969 | chr17:7894725 | G/A | 0.000327 | 211 | 16.43 | 15.33 | 11.2 | KM Plot |
KIRP | rs78845904 | chr10:75517249 | C/A | 0 | 212 | 16.45 | 14.95 | 2.47 | KM Plot |
KIRP | rs78856619 | chr10:63437951 | C/T | 0 | 211 | 18.02 | 6.2 | 6.7 | KM Plot |
KIRP | rs78885728 | chr11:34970164 | G/A | 0 | 211 | 15.2 | 19.3 | 3.83 | KM Plot |